Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQS-PDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY
1YVY Chain:A ((275-318))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEGGCYAKVINLSKENEPDIWGAIKRNALLENVTVDANGKVDFADKSVTENTRVSYPIFHIKNIVKPVSKAPAAKRVIFLSADAFGVLPPVSILSKEQTKYYFLSGFTAKPTPTFSSCFGAAFLTLPPTKYAEVLVKRM


General information:
TITO was launched using:
RESULT:

Template: 1YVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -2581 for 182 contacts (-14.2/contact) +
2D Compatibility (PS) -4216 + (NN) 1779 + (LL) 10028
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 1410.0 ( 7.75 by residue)
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_1YVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YVY-query.scw
PDB file : Tito_Scwrl_1YVY.pdb: