Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVPKRVKHRREFRGKMRGEAKGGKEVSFGEYGLQATTSHWITNRQIEAARIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKVMFEIAGVSEEVAREALRLASHKLPVKCKFVKREAE
1WKI Chain:A ((1-136))
MLMPRRMKYRKQQRGRLKGATKGGDYVAFGDYGLVALEPAWITAQQIEAARVAMVRHFRRGGKIFIRIFPDKPYTKKPLEVRMGKGKGNVEGYVAVVKPGRVMFEVAGVTEEQAMEALRIAGHKLPIKTKIVRRDAY
General information:
TITO was launched using:
RESULT:
Template:
1WKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44422 for 889 contacts (-50.0/contact) +
2D Compatibility (PS) -14767 + (NN) -5990 + (LL) 0
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -82829.0 ( -93.17 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1WKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKI-query.scw
PDB file :
Tito_Scwrl_1WKI.pdb
: