Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
4NTZ Chain:A ((6-217))
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNLK
General information:
TITO was launched using:
RESULT:
Template:
4NTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82928 for 1586 contacts (-52.3/contact) +
2D Compatibility (PS) -23155 + (NN) -11822 + (LL) 0
1D Compatibility (HY) -25600 + (ID) 8950
Total energy: -152455.0 ( -96.13 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_4NTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NTZ-query.scw
PDB file :
Tito_Scwrl_4NTZ.pdb
: