Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGDLHARRQAAAYVRNEIASENYDEASDKYTSTTALQKLFDDIAPRYAERNGGYTRILKTEPRRGDAAPMAIIELV
3J3V Chain:N ((1-120))
MSYRKLGRTSAQRKAMLRDLTTDLIINERIETTETRAKELRSVVEKMITLGKRGDLHARRQAAAYIRNEVANEENNQ--------DALQKLFSDIATRYEERQGGYTRIMKLGPRRGDGAPMAIIELV
General information:
TITO was launched using:
RESULT:
Template:
3J3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21565 for 784 contacts (-27.5/contact) +
2D Compatibility (PS) -13348 + (NN) -7147 + (LL) 272
1D Compatibility (HY) -12000 + (ID) 4750
Total energy: -58538.0 ( -74.67 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3J3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J3V-query.scw
PDB file :
Tito_Scwrl_3J3V.pdb
: