Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVK---KGLEMTRDSLIQALKEEGVEEVEV--DSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN
4ANI Chain:A ((58-211))
-----------------------------------AEELAAAKAQIAELEA---KLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETDNEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEP-NTVVEELQKGYKLKDRVLRPAMVKVSQ
General information:
TITO was launched using:
RESULT:
Template:
4ANI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27373 for 848 contacts (-32.3/contact) +
2D Compatibility (PS) -15967 + (NN) -3452 + (LL) 3524
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -55368.0 ( -65.29 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_4ANI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ANI-query.scw
PDB file :
Tito_Scwrl_4ANI.pdb
: