Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGVINVDTQTPLGTMRRQVTCDVCQGSGQEIKEKCPTCHGTGHEKKTHKVSVKIPAGVETGQQIRLTGQGEAGFNGGPYGDLFVIINVLPSQQFERNGSTIYYTLKISFVQAALGDTIDIPTVHGAVEMSIPAGTQTGKTFRLRGKGAPKLRGGGQGDQHVTVNIVTPTKLNDAQKEALH--AFAEASGDKMVHPKKKGFFDKVKDALDVD |
3LZ8 Chain:A ((113-297)) | -----------------------------------------------------------------------------------------------------------------AAR-GHDLE------IEVAVFLEETLAEQTRTISYN-------------LPVYNVFG-----IESETP----------------------------------KT--LNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGL--VSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31063 for 1110 contacts (-28.0/contact) +
2D Compatibility (PS) -19693 + (NN) -8039 + (LL) 4940
1D Compatibility (HY) -12800 + (ID) 3500
Total energy: -70155.0 ( -63.20 by residue)
QMean score : 0.466
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