Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVAKKTVIEPGEITLVPTGIKAHMQPGEVLYLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITDQAVILEEGERIVQAVFAPFLLADDDQATGMRTGGFGSTGK
3H6X Chain:A ((4-132))
---TRGFELITDYTDENLLPKRETAHAAGYDLKVAERTEISAGAIVLVPTGVKAYMQVGEVLYLFDRSSNPRKKGLVLINSVGVIDGDYYNNPNNEGHIFAQMKNMTDQTVVLEAGERVVQGVFMPFLLIDG----------------
General information:
TITO was launched using:
RESULT:
Template:
3H6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18298 for 860 contacts (-21.3/contact) +
2D Compatibility (PS) -13070 + (NN) -112 + (LL) 456
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -36674.0 ( -42.64 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3H6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H6X-query.scw
PDB file :
Tito_Scwrl_3H6X.pdb
: