Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNMMKYISELTTLIALAGLMVIITLINPNFLTTNNLLNLLLQVTANGFIAFGMTFVILTGGIDLSVGSILALSSALTAGLIGHGVPVGIAIVLSVALGGILGMLNGLFISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMFLTFIILYILLHKTAFGKSVYALGGNEKAAYISGIKLNKVKIIIYTISGIMASISGLIITSRLSSAQPTAGASYEMDAIAAVVLGGTSLSGGKGRIIGTLIGALIIGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK |
| 2PN1 Chain:A ((56-103)) | --DEVEYIDHLLTLCQDEGVTALLTLIDPE-------LGLLAQATER-FQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYATMASFEEALAAGEVQLPVFVKPRNGDLIVQELLVGQELGVDAYVDLISGKVTSIFIKEKLTMRAGETDKSRSVLRDDVFELVEHVLDGSGLVGPLDFDLFDVAGTLYLSEINPRFGGGYPHAYECGVNFPAQLYRNLMHEINVPQIGQYLDDIYMLKHDTVTLISAAELQKIKR-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47654 for 275 contacts (-173.3/contact) +
2D Compatibility (PS) -5186 + (NN) -643 + (LL) 3396
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -56237.0 ( -204.50 by residue)
QMean score : 0.439
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