Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHG-HYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGEL-APIEDAKAMVE-TGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
| 4TO8 Chain:A ((2-285)) | -PLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGG--DDVVADGIIYADPKECQELVEKTGIDALAPALGSVHG-----PK-LGFKEMEEIGLST-GLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDV---LNND------KEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148336 for 2410 contacts (-61.6/contact) +
2D Compatibility (PS) -30940 + (NN) -18257 + (LL) 1136
1D Compatibility (HY) -24000 + (ID) 6550
Total energy: -226947.0 ( -94.17 by residue)
QMean score : 0.699
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