Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSKLDNLYMAVVADHSKHPHHHGFLEGVEQVQLNNPTCGDVISLSVKFDGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLADVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL
1SU0 Chain:B ((6-141))
-----LNHLYMAVVADHSKRPHHHGQLDGVEAVQLNNPTCGDVISLTVKFDEDKIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWNALKEAIKR------
General information:
TITO was launched using:
RESULT:
Template:
1SU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82630 for 1098 contacts (-75.3/contact) +
2D Compatibility (PS) -14518 + (NN) -8392 + (LL) 952
1D Compatibility (HY) -16000 + (ID) 5400
Total energy: -125988.0 ( -114.74 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1SU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SU0-query.scw
PDB file :
Tito_Scwrl_1SU0.pdb
: