Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
4MN8 Chain:A ((488-523))
---------------SNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFS
General information:
TITO was launched using:
RESULT:
Template:
4MN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3247 for 158 contacts (-20.6/contact) +
2D Compatibility (PS) -3507 + (NN) 949 + (LL) 1300
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -7155.0 ( -45.28 by residue)
QMean score : 0.014
(partial model without unconserved sides chains):
PDB file :
Tito_4MN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MN8-query.scw
PDB file :
Tito_Scwrl_4MN8.pdb
: