Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIDKKEFLALIASIILLIFASVTFFLFKDHGTTQMDTVESSVNHVSDSQLTEAQDMLDKFEKKPSEKLLKDVELALNKLSNSSKKEALQK-RFKKAKDKYLKDEA--DKKATKDAT-------DLVEILEQAPSEENVLKAEAAVNKLTVKESKEALQKRIDTVKTQYGLIGNQTPSSSVAETTEQGTANPASQDTSSYVNQNVAPTYEQPQTNNTPVTPGVNNTVPTPGTGTAPATNGTGVAQ |
3GOD Chain:A ((113-212)) | -------------------------------------------------------------EYRPTEYLQRWVGFWFDEEKRLVAARHFQRARLERIRHSWLEDRVLRDAGFAVDATALAVAVEDSARALEQAPNHEHLLTEEARLSKRLFKLAAQA---------TRYGEFVRAKRGSGGDPANRFLDHGNYLAYGLAATATWVLGIPHGLAVLHGKTRRGGLVFDVADLIKDSLILPQAFLSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28780 for 453 contacts (63.5/contact) +
2D Compatibility (PS) -10063 + (NN) -10818 + (LL) 6372
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: 9621.0 ( 21.24 by residue)
QMean score : 0.432
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