Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKESFKLIATAAAGLEAIVGREIRNLGIDCQVENGRVRFHGDIKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGLDWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKLQKVFHRPEGVPLQENGAEFKIEVSILKDKATVMIDTTGSSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWPWVDQSQVQKVRDEAESKANYDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLKTDKINGVIISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDEGFEKKYGSQADKKRKLYNGTLKVDLYQYYGERVRRQVK
3LDG Chain:A ((2-380))-KKTFNLVATAAAGIEAVVGKELRNLGLDCQVENGRVLFKGNIETIAKSNLWLRSADRIKIVVGEFPARTFEELFQGVYALDWENYLPLGCQFPVAKAKSVKSKLHNEPSIQGITKKAIVKKLQHYFHRPDSVPLPENGPEFKIEISLLKDQARVMIDTTGPSLFKRGYRTE---APIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTDFEQKFGRKADKKRKLYNGSLKVDLYQFYGQRVK----


General information:
TITO was launched using:
RESULT:

Template: 3LDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187156 for 3155 contacts (-59.3/contact) +
2D Compatibility (PS) -40313 + (NN) -14320 + (LL) 404
1D Compatibility (HY) -49600 + (ID) 15000
Total energy: -305985.0 ( -96.98 by residue)
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_3LDG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LDG-query.scw
PDB file : Tito_Scwrl_3LDG.pdb: