Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKESFKLIATAAAGLEAIVGREIRNLGIDCQVENGRVRFHGDIKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGLDWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKLQKVFHRPEGVPLQENGAEFKIEVSILKDKATVMIDTTGSSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWPWVDQSQVQKVRDEAESKANYDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLKTDKINGVIISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDEGFEKKYGSQADKKRKLYNGTLKVDLYQYYGERVRRQVK |
3LDG Chain:A ((2-380)) | -KKTFNLVATAAAGIEAVVGKELRNLGLDCQVENGRVLFKGNIETIAKSNLWLRSADRIKIVVGEFPARTFEELFQGVYALDWENYLPLGCQFPVAKAKSVKSKLHNEPSIQGITKKAIVKKLQHYFHRPDSVPLPENGPEFKIEISLLKDQARVMIDTTGPSLFKRGYRTE---APIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTDFEQKFGRKADKKRKLYNGSLKVDLYQFYGQRVK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187156 for 3155 contacts (-59.3/contact) +
2D Compatibility (PS) -40313 + (NN) -14320 + (LL) 404
1D Compatibility (HY) -49600 + (ID) 15000
Total energy: -305985.0 ( -96.98 by residue)
QMean score : 0.586
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