Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETEEG--LNTVGDLVAYVEEKVK
4DXE Chain:H ((25-96))
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFIN----
General information:
TITO was launched using:
RESULT:
Template:
4DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45112 for 462 contacts (-97.6/contact) +
2D Compatibility (PS) -7115 + (NN) -458 + (LL) 464
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -60771.0 ( -131.54 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_4DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DXE-query.scw
PDB file :
Tito_Scwrl_4DXE.pdb
: