Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLLYYFIYLIKVIGNGLKLSLICGLNWLIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRMKTPLFLGVMYVFFLAGNSYIKAHLLTEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLKKVIDKEYLGIRKFTDSLPPEINLYKDADEEDADKRMR---LINQNVIKHPYQEVVELSFLNREVITAIGYKAVPFEKETERTFIDDDTIYYPIFTVHPFRNLEGKSDFYHILMKLKLSRKAAFTKNGERLLIRDF |
4OPL Chain:A ((162-202)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------RSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFFDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2441 for 117 contacts (-20.9/contact) +
2D Compatibility (PS) -3893 + (NN) -1793 + (LL) 16668
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 5791.0 ( 49.50 by residue)
QMean score : 0.340
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