Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYLSKLSDLDPSLMDADSEQIYIPKVLFEHNDFKGLTYKEILLYSFLLNRLREPLDFIQKGYDDNEDTYVHFKVEDLCELLNQSKTTVISLKKRLAQYGLIEEVKAGSHQPNRIYLTDKLVPYIKG
4PT7 Chain:A ((19-115))
-----------------------IPKVFFTSENYKNLTNDMKIAYAILRDRLN--LSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
General information:
TITO was launched using:
RESULT:
Template:
4PT7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44266 for 637 contacts (-69.5/contact) +
2D Compatibility (PS) -10398 + (NN) -4127 + (LL) 1492
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -67699.0 ( -106.28 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_4PT7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PT7-query.scw
PDB file :
Tito_Scwrl_4PT7.pdb
: