Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKQKIAVLGPGSWGTALAQVLNDNGHEVRLWGNVVEQIEEINTSHTNQRYFKDITLDSKIKAYTNLEEAINNVDSILFVVPTKVTRLVAKQVANLLKHKVVIMHASKGLEPGTHERLSTILEEEISEQYRSDIVVVSGPSHAEEAIVRDITLITAASKDIGAAKYVQKLFSNHYFRLYTNTDVVGVETAGALKNIIAVGAGALHGLGYGDNAKAAIITRGLAEITRLGVQLGADPLTFSGLSGVGDLIVTGTSVHSRNWRAGDALGRGEKLEDIEKNMGMVIEGISTTKVAYEIAQNLNVYMPITEAIYKSIYEGANIKDSILDMMSNEFRSENEWH |
| 1Z82 Chain:A ((16-325)) | ----RFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSP-YVEESKIT--VRATNDLEE-IKKEDILVIAIPVQYIR---EHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPY----AVLSGPSHAEEVAKKLPTAVTLAGEN---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155822 for 2842 contacts (-54.8/contact) +
2D Compatibility (PS) -32480 + (NN) -2797 + (LL) 2168
1D Compatibility (HY) -20400 + (ID) 6800
Total energy: -216131.0 ( -76.05 by residue)
QMean score : 0.510
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