Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWMINNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIKESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSPQPWKE-----WRETDKHFDQGNL
3O0K Chain:A ((28-156))
---TVKLNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGSGIARADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRV
General information:
TITO was launched using:
RESULT:
Template:
3O0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32444 for 895 contacts (-36.3/contact) +
2D Compatibility (PS) -12989 + (NN) -1360 + (LL) 184
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -58309.0 ( -65.15 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3O0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0K-query.scw
PDB file :
Tito_Scwrl_3O0K.pdb
: