Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV |
1YHF Chain:A ((2-111)) | -SYINNIEHAKVLDLTQEVMIEQDQMLSRTLVQRQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVVVKPEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1712 for 682 contacts (2.5/contact) +
2D Compatibility (PS) -9940 + (NN) 7800 + (LL) 208
1D Compatibility (HY) 1600 + (ID) 750
Total energy: 630.0 ( 0.92 by residue)
QMean score : 0.027
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