Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRKYKQRNYNVAHTKQRFSIKKFKFGVASVLIGLTFLGMSSHSVLADESSIMSTEVPQTAGVKPEVTVTQPTSDVTSLATDTSTSAVLSTDASHSNPTESAEHAVGLEC
1OHF Chain:A ((378-407))
------------------------------------------------------------AGTNATITITAPTVTLTILATTTSAANVIN--------------------
General information:
TITO was launched using:
RESULT:
Template:
1OHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -493 for 112 contacts (-4.4/contact) +
2D Compatibility (PS) -3367 + (NN) -1953 + (LL) 5460
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -3003.0 ( -26.81 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1OHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OHF-query.scw
PDB file :
Tito_Scwrl_1OHF.pdb
: