Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNSTLTKLTRVAILSALCVVLRYAFAPLPNIQPITAIFLITVVLFDLKEGVATVTITMLVSSFLMGFGPWVFLQIISFTLILCLWKFLIYPLTKAVCFGKITEVVLQTFFAGGLGVVYGVIIDTCFAWLYHMPWWTYVLAGLSFNMAHALSTCLFYPLLLPILRRFRNEKIH |
| 3E9M Chain:A ((130-182)) | ------------------------------------------------------------------------------------------------------ITQKVKATIQEGGLGEILWVQSVTAYPNVDHIPWFYSREAG-----GGALHGSGSYPLQYLQYVLGKEIQEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16432 for 224 contacts (-73.4/contact) +
2D Compatibility (PS) -5316 + (NN) 1574 + (LL) 10732
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -10442.0 ( -46.62 by residue)
QMean score : -0.156
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