Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYG-RIVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQSALLAYQEVYGQLSSP----YMVVGNVHDFNDGLNLSYQLVKE-VSIDGILATSDEVAAGLIKGYEESRKKCPY---IIGQECLLVGQLLK--LPTIDHKSYYLGKLAFKQALAEKISQEVLFSEFLSQDN |
| 2HSG Chain:A ((4-303)) | --TIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLAS-KTTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFV-SGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGD-YTYDSGIEAVEKLLEEDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVQLPHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176403 for 2264 contacts (-77.9/contact) +
2D Compatibility (PS) -30618 + (NN) -11905 + (LL) 508
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -239218.0 ( -105.66 by residue)
QMean score : 0.544
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