Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNTCGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVASYLKKY-PQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDYLFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD |
| 4JJP Chain:A ((8-248)) | ---KIPTLTIAGSDSSGGAGIQADLKTFSAIGTYGMSVITAITAQNTKGVFAVEDLNKKIIKKQIEAVFEDIPPRAVKIGMVSSPEIILEIVENLKKYNPKYLVVDPVMISKSGYYLLKPEAKENLIKYLIPLAYIITPNIPEAEEITGIKIHNVDDMKRVGEEIL-QLGPKFVLMKGGHLDGEAVDIL-VGKNIFKVYKSE----------GCTLSSAITSYLALGYEITEAVNLSKIYITEAIK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144746 for 1981 contacts (-73.1/contact) +
2D Compatibility (PS) -24682 + (NN) -5743 + (LL) 968
1D Compatibility (HY) -18400 + (ID) 5350
Total energy: -197953.0 ( -99.93 by residue)
QMean score : 0.496
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