Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTGASYPKYRFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTIT---GMNHPTDHITTNPFIYYKSRGFINEDRADLIDE-KKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
3EEV Chain:A ((61-195))
---------------------------------IGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQD-----NDNFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHIKFRFSDVEIAMLLEMAWWNWPESWLKESMQSLCSSDIEGLYLNWQSKAR----
General information:
TITO was launched using:
RESULT:
Template:
3EEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79131 for 855 contacts (-92.6/contact) +
2D Compatibility (PS) -14657 + (NN) -8300 + (LL) 2104
1D Compatibility (HY) -12000 + (ID) 3050
Total energy: -115034.0 ( -134.54 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3EEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEV-query.scw
PDB file :
Tito_Scwrl_3EEV.pdb
: