Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
| 4M0H Chain:A ((186-206)) | ---------------------------------------------------------------------------------------------------------------------------------PNVVFDDYIYGEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYKTS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 732 for 52 contacts (14.1/contact) +
2D Compatibility (PS) -2181 + (NN) -770 + (LL) 9552
1D Compatibility (HY) -2400 + (ID) 500
Total energy: 4433.0 ( 85.25 by residue)
QMean score : 0.179
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