Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKDKYIVLCLLCAIATSNLSAVTVFAQDAQTILTQATTVTDQTSEKAGENSSAEATSASESVSSEATTVVPEASLPSTDLHA-QPADS-----KTAPTETVIEGQTETNPTTSPDKQFLQQAIPKEKHRLGRKQIQANPKLQLLVSL |
3VXM Chain:E ((51-102)) | ----------------------------------------------------SYEKLSINESVPSRFSPECPNSSLLNLHLHALQPEDSALYLCASSPTSGIYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3940 for 171 contacts (23.0/contact) +
2D Compatibility (PS) -4740 + (NN) 241 + (LL) 4500
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 941.0 ( 5.50 by residue)
QMean score : 0.492
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