Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTETKGDAIDVMQSSESISGTTNSITDSHTSIKHGVTLLSQNISQAKKAKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
4FDY Chain:A ((51-197)) | ----------------------------PEVLAHRPLIEKYGKEYGIEDYVSYILAIMQVESGGTAEDVMQSSESLGLPPNSLS-TEESIKQGVKYFSELLTSAEQQGVDIDSVIQSYNYGGGFLNYVRSHGKKYTYELAEQFSKEKSG-------GQKADYPNPIAIPVNGGWRYNYGNQFYVQLVSQYLTDTSPTEFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19015 for 1098 contacts (17.3/contact) +
2D Compatibility (PS) -14754 + (NN) 567 + (LL) 3476
1D Compatibility (HY) 1600 + (ID) 800
Total energy: 9104.0 ( 8.29 by residue)
QMean score : 0.080
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