Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKKMLFGSYDYHKISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK
4I6M Chain:B ((49-77))
--------GSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFV
General information:
TITO was launched using:
RESULT:
Template:
4I6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7020 for 107 contacts (65.6/contact) +
2D Compatibility (PS) -2981 + (NN) 646 + (LL) 976
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 3461.0 ( 32.35 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_4I6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I6M-query.scw
PDB file :
Tito_Scwrl_4I6M.pdb
: