Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHSSWHDLIKRELPNHYYNKINTFMDAVYESGIVYPPRDKVFNAIQITPLENVKVVIIGQDPYHGPQQAQGLSFSVPDNLPAPPSLQNILKELAEDIGSR--SHHDLTSWAQQGVLLLNACLTVPEHQANGHAGLIWEPFTDAVIKVVNQKETPVVFILWGGYARKKKSLIDNPIHHIIESPHPSPLSAYRGFFGSRPFSRTNHFLEEEGINEIDWLN
3ZOQ Chain:A ((6-221))
--QDSWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCI
General information:
TITO was launched using:
RESULT:
Template:
3ZOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121263 for 1720 contacts (-70.5/contact) +
2D Compatibility (PS) -22888 + (NN) -8166 + (LL) 272
1D Compatibility (HY) -21600 + (ID) 5650
Total energy: -179295.0 ( -104.24 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOQ-query.scw
PDB file :
Tito_Scwrl_3ZOQ.pdb
: