Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVRIYHNPNCGTSRNVLAIIRHCGIEPEIIYYLKTPPSRMELVELLLEMKLSARELLRTDVPAYEKFNLESSSVTDEEMIDAMIQDPILINRPIVVTSKGAKLCRPCEEILTILPVKMEKDFVKEDGQIIQSL
1I9D Chain:A ((3-130))
--NITIYHNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDE
General information:
TITO was launched using:
RESULT:
Template:
1I9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108825 for 948 contacts (-114.8/contact) +
2D Compatibility (PS) -13517 + (NN) -4971 + (LL) 312
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -143701.0 ( -151.58 by residue)
QMean score : 0.755
(partial model without unconserved sides chains):
PDB file :
Tito_1I9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I9D-query.scw
PDB file :
Tito_Scwrl_1I9D.pdb
: