Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDL--SKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
2QPT Chain:A ((94-165)) | ------------------------------------------------------RVGPEPTTDCFVAVMHGETEGTVPG-----------------NTFLNRFMCAQLPNQVLESISIIDTPGILSRGYDFPAVLRWFAERVDLIILLFDAHKLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6537 for 241 contacts (27.1/contact) +
2D Compatibility (PS) -5330 + (NN) 295 + (LL) 4620
1D Compatibility (HY) -4000 + (ID) 650
Total energy: 1472.0 ( 6.11 by residue)
QMean score : 0.065
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