Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
| 4EQQ Chain:A ((16-107)) | --------------------------------------------------------------------------------------------------------------------RTAVSKAKQYASTVHMSKEELRSQLVS--------FDKYSQDASDYAVENSGIDYNKQALEKAKQYQDTLSMSPDAIRDQLVSF--DKFTQEEADYAVANLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1685 for 716 contacts (-2.4/contact) +
2D Compatibility (PS) -9995 + (NN) -3619 + (LL) 8748
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -14951.0 ( -20.88 by residue)
QMean score : 0.672
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