Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEFLNTHNASILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQIYEFLKYYEIPVIIVATKADKIPRGKWNKHESSIKKKLNFDKKDHFIVFSSVDRTGLDESWDTILSEL
1SUL Chain:A ((1-189))
-----MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLA---------QTLNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMI
General information:
TITO was launched using:
RESULT:
Template:
1SUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100815 for 1382 contacts (-72.9/contact) +
2D Compatibility (PS) -19439 + (NN) -6149 + (LL) 656
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -152797.0 ( -110.56 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1SUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUL-query.scw
PDB file :
Tito_Scwrl_1SUL.pdb
: