Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTVTPKETAGSFINKVLGGTATAIVVALIPNAILATFLKPFLSYGLAAEFLHIVQVFQFFTPIMAGFLIGQQFKFTPMQQLAVGGAAYIGSGAWAYTEVIQKGVATGSFQLRGIGDLINMMLTAALAVLAVKWFGNKFGSLTIILLPIIIGTGVGYLGWKLLPYVSYVTTLIGQGINSFTTLQPIAMSILIAMAFSMLIVSPISTVAIGLAIGLNGMSASAASMGVASTTAVLVWATMKANKSGVPIAIALGAMKMMMPNFLKHPVMAIPMLMTATVSSLTVPLFKLVGTPASSGFGLVGAVGPIASFEAGASMLIVILSWLVIPFAVGFVSHKICKDILKLYKDDIFVFEGQN |
| 3USB Chain:A ((294-369)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCAT-EARKHGIPV-IADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRENAQFIRMSGAGLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3USB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86846 for 550 contacts (-157.9/contact) +
2D Compatibility (PS) -8070 + (NN) -436 + (LL) 15132
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -83520.0 ( -151.85 by residue)
QMean score : 0.247
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