Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPL-VAENQVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVMTKFHDQKFSK
4K0K Chain:P ((2-80))
--VKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEA------
General information:
TITO was launched using:
RESULT:
Template:
4K0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39069 for 538 contacts (-72.6/contact) +
2D Compatibility (PS) -7738 + (NN) 568 + (LL) 688
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -52801.0 ( -98.14 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_4K0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K0K-query.scw
PDB file :
Tito_Scwrl_4K0K.pdb
: