Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKELGKTLRRLRKGKKVSISSLADEHLSKSQISRFERGESEITCSRLLNILDKLNITIDEFVSIHSKAHTHFFILLNRVRKYCAEKNVTKLVALLEDHNHKDYEKIMIKALIFSIDQSIEPNQEELARLTDYLFTVEQWGYYEIILLGNCSRLINYNTLFLLTKEMVNSFAYSEQNKTNKILVTQLAINCLIISIDHSYFEHSHYLIDKVRSLLQDEVNFYEKTVFLYVTGYYHLKLGDTSSGKEDMRKALQIFKYLGEDSFYNTYNEHYCQKVLGNNKEC |
4YV9 Chain:A ((5-274)) | ----LGKTLRRLRQGKQVSISSL----LSKSQISRFERGESEISCSRLLNLLDKLNITIDEFVST-----THFFTLLSRVRKYYAEKNVAKLLKLLEDYAHKDYESTMIKAILSSIEPTVEPSEEEVTRLTDYLFSVEQWGYYEIILLGNCSRFINYNTLFLLTKEMVTSFAYSEQNKTNKTLVTQLSINCLIISIDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYKLKQGQV-SGKDDMRQALQIFKYLGEDALYYSYKEHYRKEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74057 for 1822 contacts (-40.6/contact) +
2D Compatibility (PS) -26431 + (NN) -7112 + (LL) 1156
1D Compatibility (HY) -8400 + (ID) 4400
Total energy: -119244.0 ( -65.45 by residue)
QMean score : 0.298
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