Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETE-QIVFIDTPGIHKPKTA--LGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIER-LKAAKIPVILVINKIDKVHPDQ-LLEQIDDF-RSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKR-DEETDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYNEKEY
3R9W Chain:A ((7-305))--MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL---


General information:
TITO was launched using:
RESULT:

Template: 3R9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180181 for 2355 contacts (-76.5/contact) +
2D Compatibility (PS) -32063 + (NN) -12685 + (LL) 348
1D Compatibility (HY) -30800 + (ID) 7000
Total energy: -262381.0 ( -111.41 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_3R9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9W-query.scw
PDB file : Tito_Scwrl_3R9W.pdb: