Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYR-KGLNPIVSFPEIDAPTTMDNEGRIITLELENCYITQVYTPNAGDGLKRLGDRQIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQDHTPIILEIEL |
2O3C Chain:A ((27-278)) | MKITSWNVDGL---------RAWVKKNGLDWVRKEDPDILCLQETKCA-----EKALPADITAMPEYPHKYWAGSE-DKEGYSGVAMLCKTEPLNVTYGI----GKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYM-MNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFLAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87197 for 2130 contacts (-40.9/contact) +
2D Compatibility (PS) -27044 + (NN) -9385 + (LL) 408
1D Compatibility (HY) -17600 + (ID) 5200
Total energy: -146018.0 ( -68.55 by residue)
QMean score : 0.520
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