Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNIT-DTSFLIGDGTGRGSANA-----NYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQVQKGLF-----IYGEDSKLHEITSKA--PIYYYGFEDSNDFIAKDITRTVNGSDFKVFY-NQEEIG-QFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTE-----KIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHS-------DLVTVENVSPL------LNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 1GQY Chain:A ((22-475)) | -----HFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQR-LAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPD---------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVP--GKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLDVYAA------GEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESWKN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209176 for 3472 contacts (-60.2/contact) +
2D Compatibility (PS) -44817 + (NN) -18735 + (LL) 1432
1D Compatibility (HY) -22000 + (ID) 7050
Total energy: -300346.0 ( -86.51 by residue)
QMean score : 0.493
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