Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDGEIGTSFDQVQQIVEQNDKKTLLAFFDLGSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK
3CT6 Chain:A ((4-123))
----GIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIEK
General information:
TITO was launched using:
RESULT:
Template:
3CT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92669 for 947 contacts (-97.9/contact) +
2D Compatibility (PS) -13190 + (NN) -5662 + (LL) 308
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -128513.0 ( -135.71 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3CT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT6-query.scw
PDB file :
Tito_Scwrl_3CT6.pdb
: