Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIIVAHGNFPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVIDFKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTCLATQTAEATFEGGI
4TKZ Chain:A ((1-130))
MIKIIIVAHGNFPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVIDFKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTC--------------
General information:
TITO was launched using:
RESULT:
Template:
4TKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109597 for 995 contacts (-110.1/contact) +
2D Compatibility (PS) -13872 + (NN) -8 + (LL) 1084
1D Compatibility (HY) -22800 + (ID) 6500
Total energy: -151693.0 ( -152.46 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_4TKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TKZ-query.scw
PDB file :
Tito_Scwrl_4TKZ.pdb
: