Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIIQRVNQASVSIEDDVVGSIEKGLVLLVGIAPEDTTEDIAYAVRKITSMRIFSDDEGKMNLSIQDIKGSVLSISQFTLFADTKKGNRPAFTGAADPVKANQFYDIFNQELANHVSVETGQFGADMQVSLINDGPVTIVLDTKNK
1J7G Chain:A ((1-143))
MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDKMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLPVSTGQFAADMQVSLTNDGPVTFWLNV---
General information:
TITO was launched using:
RESULT:
Template:
1J7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105632 for 1113 contacts (-94.9/contact) +
2D Compatibility (PS) -15389 + (NN) -5098 + (LL) 36
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -142833.0 ( -128.33 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1J7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J7G-query.scw
PDB file :
Tito_Scwrl_1J7G.pdb
: