Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRTVSKLVINNLDLYYGEFHALKDVNLDIEEKEITAFIGPSGCGKSTLLKSINRMNDLVKNCKITGDITLEGEDVYRQLDINQLRKKVGMVFQKPNPFP-MSIYDNVAFGPRTHGIHSKAELDDIVERSLKQAALWDEVKDRLHKSALGMSGGQQQRLCIARALAIEPDVLLMDEPTSALDPISTAKIEELVIQLKK-NYTIVIVTHNMQQAVRISDKTAFFLMGEVVEYNKTSQLFSLPQDERTENYITGRFG
4U00 Chain:A ((7-238))---------IRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQE-----GEVVVDGLSVKDDRALREIRREVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQAR----KYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH


General information:
TITO was launched using:
RESULT:

Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99636 for 1903 contacts (-52.4/contact) +
2D Compatibility (PS) -24798 + (NN) -7670 + (LL) 1468
1D Compatibility (HY) -17200 + (ID) 4300
Total energy: -152136.0 ( -79.95 by residue)
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_4U00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U00-query.scw
PDB file : Tito_Scwrl_4U00.pdb: