Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDEPDNRRGRKLYVGDVVEIEGFGSFQVVN
4PZ0 Chain:A ((242-288))
------------TVQQF-GLWDVKQQGALATYVANEIVV---------KGKKLKVGDSFEVKGIGKVKV--
General information:
TITO was launched using:
RESULT:
Template:
4PZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6432 for 212 contacts (-30.3/contact) +
2D Compatibility (PS) -4944 + (NN) -437 + (LL) 1412
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -15851.0 ( -74.77 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_4PZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PZ0-query.scw
PDB file :
Tito_Scwrl_4PZ0.pdb
: