Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSGLSHETSKSFDLYGNSRTLGLVKEIDDKLIQLTEEMMDQEKPAIDLLERIGEIKGLLINLYT
2QUP Chain:A ((25-145))
-------------------------VSFSEVMGKQRDEKAYERLQALMSKIDDQGKLLSETRTIEELRKYKELVKEFVGDAVELGLRLEER---NRRGRTKIYKIVKEVDRKLLDLTDAVLAKEKKGLDILNMVGEIKGLLINIYA
General information:
TITO was launched using:
RESULT:
Template:
2QUP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42602 for 774 contacts (-55.0/contact) +
2D Compatibility (PS) -12788 + (NN) -6049 + (LL) 1948
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -74641.0 ( -96.44 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_2QUP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUP-query.scw
PDB file :
Tito_Scwrl_2QUP.pdb
: