Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYET-----AKEQLPDIGEMITTAN--G---PAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
| 2MAM Chain:A ((15-105)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKYRG-AFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPLRVGAIVETRTSDGSFQEAIISKLTD-ASWYTVVFDDGD-ERTLRRTSLCL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7598 for 475 contacts (-16.0/contact) +
2D Compatibility (PS) -8195 + (NN) 3632 + (LL) 15016
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -945.0 ( -1.99 by residue)
QMean score : 0.169
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