Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK
3IPF Chain:A ((22-81))
----------------------NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVY------------------
General information:
TITO was launched using:
RESULT:
Template:
3IPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31868 for 399 contacts (-79.9/contact) +
2D Compatibility (PS) -6056 + (NN) 1690 + (LL) 1864
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -43320.0 ( -108.57 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3IPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPF-query.scw
PDB file :
Tito_Scwrl_3IPF.pdb
: