Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR |
| 2KFE Chain:A ((3-22)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GREFMSNLKEKLSGVKEKMK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1906 for 76 contacts (25.1/contact) +
2D Compatibility (PS) -2152 + (NN) -1565 + (LL) 21564
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 18353.0 ( 241.49 by residue)
QMean score : 0.110
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