Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVT------------REEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNNSFYEDEHTTEKEWKDQIRYNILLEDLLTRDIDISNKELESFYNKNKELYQFDDSYRIRHIVVKDEEEAREVLKELKG------GSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKAR-TFSFDEVKDQIRRQIAMDQLGDKATVKTLWKEADVSWFYGEKSTK |
3RFW Chain:A ((23-253)) | -------------------------------------TVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNL-------EKDPLYTKELDRA------------KDAILVNVYQEKILNT-IKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKP--FTDAAFALKNGTITTTPVKTNFGYHVI-LKENSQAKGQIKFDEVKQGIENGLKFEEF------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37675 for 1277 contacts (-29.5/contact) +
2D Compatibility (PS) -22923 + (NN) -7678 + (LL) 6376
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -80100.0 ( -62.73 by residue)
QMean score : 0.610
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