Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADKFQCVPSQINYVINTRFTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQINTHLSQAASDDIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTSLKLK
3H0D Chain:A ((2-152))
---NISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFRCVPSQINYVINTRFTLERGYIVESKRGGGGYIRIMKVKTKSEAQLIDQLLELIDHRISQSSAEDVIKRLMEEKVISEREAKMMLSVMDRSVLYIDLPERDELRARMLKAMLTSLKYK
General information:
TITO was launched using:
RESULT:
Template:
3H0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102913 for 993 contacts (-103.6/contact) +
2D Compatibility (PS) -16445 + (NN) -8023 + (LL) 80
1D Compatibility (HY) -20400 + (ID) 5550
Total energy: -153251.0 ( -154.33 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3H0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0D-query.scw
PDB file :
Tito_Scwrl_3H0D.pdb
: